Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs76235981 chr4:70123225 G/A 4.7E-13 119 41.77 35 6 KM Plot
THYM rs76236957 chr4:70081092 C/G 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs76309561 chr6:151421826 A/C 0 119 38.13 55.1 4.13 KM Plot
THYM rs76313776 chr4:70095976 G/A 4.7E-13 119 41.77 35 6 KM Plot
THYM rs76330182 chr4:70305177 A/G 6.73E-13 117 41.22 35.7 6 KM Plot
THYM rs76358617 chr5:149862396 C/T 1.77E-8 117 41.77 35.13 12.63 KM Plot
THYM rs76399107 chr11:20029148 C/T 3.35E-6 118 42.73 27.1 13.75 KM Plot
THYM rs76405233 chr12:53212944 T/C 0 118 39.75 96.37 2.9 KM Plot
THYM rs76480599 chr7:29689180 A/G 9.44E-13 116 38.33 44.3 6 KM Plot
THYM rs76494747 chr4:70082026 TC/T 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs76527410 chr4:70043375 G/T 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs76538551 chr1:227350770 A/AAT 0.000123 119 19.63 37.13 42.82 KM Plot
THYM rs7654051 chr4:115626498 C/G 0 118 38.33 44.58 4.13 KM Plot
THYM rs76572683 chr2:30808702 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs76585777 chr2:30862185 T/A 1.38E-8 119 36.03 50.13 33.13 KM Plot